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Make brand new polymer chemistry definitions; Use the definitions to perform calculations in a desktop calculator-like manner; Perform sophisticated polymer sequence mass spec simulations ; Compute isotopic clusters from formulas

MineXpert (currently MineXpert3, of the http://www.msxpertsuite.org software collection) is a desktop-oriented program that allows one to visualize mass spectrometric data in their full MS^n depth. Sophisticated mouse-driven mass data integrations are easily performed.

GeneralDichotomy: a general multi-objective optimization package

Docs : https://optirrighive.pages.mia.inra.fr/OptirrigTOOLS

OptirrigTOOLS is a lightweight R package meant to gather diverse helper functions used across the Optirrig ecosystem.

Website

metagWGS is a workflow dedicated to the analysis of metagenomic data. It allows assembly, taxonomic annotation, and functional annotation of predicted genes. Since release 2.3, binning step with the possibility of cross-alignment is included. It has been developed in collaboration with several CATI BIOS4biol agents. Funded by Antiselfish Project (Labex Ecofect), ExpoMicoPig project (France Futur elevage) and SeqOccIn project (CPER - Occitanie Toulouse / FEDER), ATB_Biofilm funded by PNREST Anses, France genomique (ANR-10-INBS-09-08) and Resalab Ouest.

https://genotoul-bioinfo.pages-forge.inrae.fr/d-genies/dgenies-new-proto-ui

Tropolink backend (API)

mechanistic-statistical environment

https://msegrp.pages-forge.inrae.fr/mse