- update repeat nucleic consensus database : Dfam + TREP + ArTEdb + MycoMobilome + InpactorDB
- change parameter name : rename dfam_consensus_db to repeats_consensus_db in all conf/modules/utils and template files
- masking:
- mask mirror ncRNA predictions in early steps
- mask V0 ncRNA predictions that match repeats_consensus_db
- do not use ab initio ncRNA predictions (rfam/trna/rrna) for unmasking
- deactivate EuGene MarkovIMM.npcRNAModel for non plant genomes