Explore projects

The PFG2 shiny app aim is to help the user select and screen PFGs based on traits values both linked to the main ecological dimensions and to the ecosystem services modules as well as filters trait values.

https://pfg2.sk8.inrae.fr

Mes modèles de documents latex pour les rapports institutionnels et autres

Galaxy wrappers for met4j apps

https://abarnabe.pages-forge.inrae.fr/slides/

MassChroQ (Mass Chromatogram Quantification) is a powerful and versatile software that performs retention time alignment, XIC extraction, peak detection and quantification on data obtained from liquid chromatography-mass spectrometry techniques.

Supports pour la formation shiny - Plateforme de Biostatistique – Génopole Toulouse Midi-Pyrénées

Supports : https://elisemaigne.pages-forge.inrae.fr/formation-shiny/

This project is the source repository of the CRAN package 'hicream' https://cran.r-project.org/package=hicream.

It performs Hi-C data differential analysis based on pixel-level differential analysis and a post hoc inference strategy to quantify signal in clusters of pixels. Clusters of pixels are obtained through a connectivity-constrained two-dimensional hierarchical clustering.

F3MR is a R package that help to analyze food microbiome omics data based on dedicated and curated metabolic modules based on extensive literature review. It belongs to F3M software suite developed by INRAE Food Microbial Ecology lab