Explore projects

Free-D libraries: a collection of C++ libraries

Free-D libraries: a collection of C++ libraries

Pan1c: a Snakemake workflow to build chromosome level pangenomes.

This repository contains various sources for INRAE documents in LaTeX:

Beamer template for INRAE presentation. This is an unofficial template, inspired by the official ppt presentation template, provided as is and without any guarantee. Images remain the property of INRAE.

CSS files. They include several unofficial templates, without the original comment and inspired by CSS report files (évaluations et annexes).

part of the ANR D2KAB project, this repository is dedicated to the construction of semantic resources (RDF dataset and OWL ontologies) that will represent plant phenological development stages for agricultural practices.

Java library for metabolic networks

metagWGS is a workflow dedicated to the analysis of metagenomic data. It allows assembly, taxonomic annotation, and functional annotation of predicted genes. Since release 2.3, binning step with the possibility of cross-alignment is included. It has been developed in collaboration with several CATI BIOS4biol agents. Funded by Antiselfish Project (Labex Ecofect), ExpoMicoPig project (France Futur elevage) and SeqOccIn project (CPER - Occitanie Toulouse / FEDER), ATB_Biofilm funded by PNREST Anses, France genomique (ANR-10-INBS-09-08) and Resalab Ouest.

PAPPSOms++ is a comprehensive C++ library including useful functions to handle mass spectrometric data, either in a proteomics setting or for data visualization. Abstractions include peptides, proteins, isotopic clusters, mass/drift spectra...

This repository is a toolbox for PFEM's GitLab projects: templates for README, CI/CD, docker images, ...

A Python scripting interface for CB-Geo MPM

Bibliothèque cliente Java pour utiliser l'API issues de GitLab pour les demandes de support des applications AgroClim.

Collectivizing useful brightway notebooks for the community.