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SK8 / sk8-apps / SA / ASTRE / arbocartoR app
CeCILL-C Free Software License AgreementL'application permet de simuler la dynamique spatio-temporelle de populations de moustiques Aedes (albopictus et aegypti) dans divers environnements et la dynamique de transmission de trois arboviroses : dengue, zika, chikungunya.
Lien vers l'application : https://arbocarto-r-app.sk8.inrae.fr
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Code and workflows for the analyses reported in “Dici: a novel DNA transposon reshaping the genome of the opportunistic yeast Diutina catenulata”
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DeCrypt / Deterministic model
GNU General Public License v3.0 or laterImplementation of the deterministic model of the intestinal including microbiota, as described in Darrigade et al., 'A PDMP model of the epithelial cell turn-over in the intestinal crypt including microbiota-derived regulations.' (2021).
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This tutorial explains how to use the qch R package for jointly analyzing multiple sets of p-values, as described in Mary-Huard et al. (2021) and the pre-print De Walsche et al. (2024).
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decod / PlanktonFlow
MIT LicenseAn end-to-end deep learning solution supporting multiple model architectures with advanced features for training, evaluation, and production-ready inference.
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Thomas Schiex / EffieDes
Creative Commons Attribution Non Commercial No Derivatives 4.0 InternationalUpdated -
PAPPSO / pappsomspp
GNU General Public License v3.0 onlyPAPPSOms++ is a comprehensive C++ library including useful functions to handle mass spectrometric data, either in a proteomics setting or for data visualization. Abstractions include peptides, proteins, isotopic clusters, mass/drift spectra...
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Support de présentation pour les sessions de formation bases de Linux et bonnes pratiques de développement informatique
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bios4biol / DeFiS
GNU General Public License v3.0 or laterDeFIS is a pipeline for archeo-ichtyologists and biologists allowing the recognition of diadromous fishes with ancient DNA sample based metrics method (such as Kmers ratio and Jaccard index) between references sequences and the samples.
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Benoît Piégu / seqbyacc-rs
GNU General Public License v3.0 or laterFilters the sequences of a fasta file from their accessions
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