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"beads" (billes en Français) est un logiciel de détection et de quantification de spots sur des images de gels d'électrophorèse bidimensionnelle.

Modified of the code CleaveLand to have the results for all isoforms. CleaveLand: a pipeline for using degradome data to find cleaved small RNA targets. Addo-Quaye C &. Bioinformatics.

Meteor (Metagenomic Explorator), a software for profiling metagenomic data at gene level

pubilc repository for the GroundWaterNitrogen nitrogen content in groundwater model developped during the ATCHA project

model documentation: https://record-open-archives.pages.mia.inra.fr/groundwaternitrogen/

Eremothecium gossypii ATCC 10895 complete genome and annotation data.

Torulaspora microellipsoides CLIB 830 complete genome and annotation data.

Adaptation of miRDeep2.0.0.5 for dicotyledons, with replaced scripts in which parameters were optimized for dicot plants. This parameters come from Characterization of statistical features for plant microRNA prediction-Thakur V &al -BMC Genomics

pubilc repository for the MF1_2 farm model developped during the ATCHA project

model documentation: https://record-open-archives.pages.mia.inra.fr/mf1_2/

Implementation of the deterministic model of the intestinal including microbiota, as described in Darrigade et al., 'A PDMP model of the epithelial cell turn-over in the intestinal crypt including microbiota-derived regulations.' (2021).

This tutorial explains how to use the metaGE R package for performing meta-analysis of genome-wide association studies to investigate gene-environments interactions, as described in De Walsche et al. (2025).

Scripts pour l'administration Nextcloud avec occ.

This repository contains a collection of general-purpose scripts for data analysis from Projet HELICOVERPA 2024

AgroforesTreeAdvice est un comparateur d’avis sur les essences d’arbres à planter en agroforesterie: il regroupe, sous une interface unique et multilingue, plusieurs outils de sélection d'arbres (espèces, variétés, porte-greffes) développés dans plusieurs pays.

https://agroforestreeadvice.sk8.inrae.fr

a simple python scripts to lexed ingredients lists into dictionnaries and/or nested lists