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Présentation de git et de son écosystème dans le cadre des rencontres ingénieurs statisticiens de Toulouse (dec. 2021).
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EMFEED / VASA / VASA Aleph Zero
CeCILL Free Software License Agreement v2.1Le projet IlluminaMetabarcodingPipeline a pour but de traiter des séquences issues de séquençage à très haut débit Illumina MySeq et d'en découvrir des modèles
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GENESIS / EAGLE
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BSV / Pdf2blocs
CeCILL Free Software License Agreement v2.1pdf2blocs merges the result of pdftotext and pdftohtml commands (from poppler project). The pdf conversion was optimized to translate the Plant Health Alert Bulletin into html files. This project is part of the d2kab project.
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GQE-BiOSS / MetaQTL
GNU General Public License v2.0 or laterMetaQTL is a Java package designed to perform the integration of data from the field of gene mapping experiments (e.g molecular markers, QTL, candidate genes, etc...). This package consists in a modular library and several programs written in pure Java. These programs can perform various tasks, including formatting, analyzing and visualizing data or results produced by MetaQTL.
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Analyse mark-release-recapture data from Sterile Insect Technique (SIT) field experiments. https://umr-astre.pages.mia.inra.fr/sit
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MOURAD Raphael / DeepSSL
MIT LicenseSemi-supervised learning with pseudo-labeling for regulatory sequence prediction
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Web page for ETLMIC : https://etlmic.pages-forge.inrae.fr/web/
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JACQUIN Laval / KRMM
GNU General Public License v3.0 or laterSolves kernel ridge regression within the the mixed model framework. All the estimated components and parameters, e.g. BLUP of dual variables and BLUP of random predictor effects for the linear kernel (also known as RR-BLUP), are available.
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TP 1 du module 8 de la formation MASTICS https://elearning.formation-permanente.inrae.fr/mod/url/view.php?id=9206
Lien vers l'application : https://mastics-tp-8-1.sk8.inrae.fr
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UMR G-EAU / RAG G-EAU
GNU Affero General Public License v3.0A RAG for administrative procedure and more at UMR G-EAU
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This project is dedicated to targets prediction of bacterial non-coding RNA and their visualisation through a web interface.
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JACQUIN Laval / refpop
GNU General Public License v3.0 or laterThis repository contains the refpop R scripts, for achieving reproducible data analysis and results, according to the FAIR principles
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TP 2 du module 8 de la formation MASTICS https://elearning.formation-permanente.inrae.fr/mod/url/view.php?id=9208
Lien vers l'application : https://mastics-tp-8-2.sk8.inrae.fr
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UMR 1348 PEGASE / bio4tapp
BSD 2-Clause "Simplified" LicenseUpdated