Explore projects

Markdown and R markdown templates created for teaching purposes.

Re-design Chip-SEQ curves to design chromatin - Demo application of functionalities.

(https://chromatin-design.sk8.inrae.fr)

RNAseq and EMseq analyses for the rosepigs project on stomach mucosa samples

Repository of Migale trainings https://trainings.migale.inrae.fr/

Landscape Epidemiology and Evolution R package

Docs

CRAN

Shiny app || Shiny Multi app

Support pour mini atelier ggplot2 (2h) https://miat.pages-forge.inrae.fr/formations/mini-atelier-ggplot2

Scripts used in: "Integration of genomic selection into winter-type bread wheat breeding schemes: a simulation pipeline including economic constraints" S. Ben-Sadoun, A. Fugeray-Scarbel, J. Auzanneau, G. Charmet, S. Lemarié, S. Bouchet

Obsolete. This modular version was not easy to manage. See packages in orgemia.inra.fr/metexplore/cbm/met4j-flux

A Gitlab project template for an R package. Use it as a base for a new R package project. See README for details.

Premier atelier régional du projet PRAPS II. https://umr-astre.pages.mia.inra.fr/training/praps2-atelier1.

PikeLake

Fork of asm4pg but for haploid or very homozygous/inbred.

R package for modelling arthropod development rates (mean and variance) as a function of temperature in nimble. Adapted from the PhD work of Soledad Castano (http://www.theses.fr/223623849).