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UTOPIA: an automatically UpdaTed, cOmPlete and consistent ITS reference dAtabase

LESSEM internal package for simulation of forest dynamic depending on climatic variables

BioMa component of the phenology model in SiriusQuality2

A demo-genetic individual-based model for Atlantic salmon populations

The aim of this project is to provide an R package for big integer (and big rational) computations. This is achieved via an C++ interface to the GNU MP ("GMP") library, and S3 classes "bigz", "bigq", etc.

CarthaGène is multi-population genetic/radiated hybrid mapping software. CarthaGene looks for multiple populations maximum likelihood consensus maps using a fast EM algorithm for maximum likelihood estimation and powerful ordering algorithms.

https://mahendra-mariadassou.pages.mia.inra.fr/jc2bim2024/

Creation and provisioning a Mac OS VirtualBox with R4 tools chain and use it as a GitLab Runner.

Présentation en ligne sur GitLab Pages

Harvest and index meta data from BrAPI endpoints for data access through the plant-faidare data lookup portal (https://github.com/elixir-europe/plant-faidare).

Repository code for the article: Neuvial Pierre, Randriamihamison Nathanaël, Chavent Marie, Foissac Sylvain, and Vialaneix Nathalie (2023) A two-sample tree-based test for hierarchically organized genomic signals. Journal of the Royal Statistical Society, Series C, 73(3), 774–795. https://dx.doi.org/10.1093/jrsssc/qlae011

Hosts the different implementation of EDA model

Présentation en ligne sur GitLab Pages inspiré par Formation INRAE PACA

scripts to remap markers as pairs of bait sequences or context sequences.

RNAseq and EMseq analyses for the rosepigs project on stomach mucosa samples

https://ecoelec.pages.mia.inra.fr/communication/ecoelec

Geomatic tool for landscape discretization and pesticides transfert

Site web pour une école thématique interdisciplinaire Inrae